Isomorphic Labs

3 weeks ago

Bioinformatics Engineer, London

✓ Verified Job

Canonical indexed version, validated from employer's careers page.

Source: Company careers pageValidated by: Fursa AI

Last checked: 7 hours agoStatus: Live

Job Summary

Build and operate large-scale bioinformatics pipelines that transform raw biological data (e.g., FASTQ, BAM, mzXML) into high-quality, curated, version-controlled datasets ready for machine learning. Harmonize public and internal data sources into a coherent representation, and partner with ML Research, Computational Biology, Drug Development, and Chemistry teams to standardize bioinformatics primitives across workflows, accelerating drug discovery projects.

Location: London

Workplace: Hybrid

Employment Type: Full time

Job Function: Data Analytics & Business Intelligence

Key Responsibilities

•Develop and operate large-scale bioinformatics pipelines for high-throughput analysis from raw data to ML-ready datasets.
•Ingest and harmonize complex datasets using bioinformatics best practices to ensure version-controlled, high-quality inputs for model training.
•Implement rigorous versioning and mapping when harmonizing public databases (e.g., Ensembl, UniProt, Reactome, Open Targets) to prevent collisions and semantic drift.
•Partner with ML Research, Computational Biology, Drug Development, and Chemistry teams to drive adoption of the internal bioinformatics platform and standardized data primitives in daily workflows.
•Act as a “Deployed Engineer” in research projects, delivering customized solutions and feeding identified technical gaps back into the core platform, with documentation and training for the wider organization.

Key Requirements

•Proven experience processing raw bioinformatics data at scale (e.g., FASTQ, BAM, mzXML).
•Track record delivering high-quality bioinformatics outputs across modalities such as genomics, proteomics, single cell, or systems biology.
•Experience writing production-grade code in Python and developing automated, scalable bioinformatics pipelines.
•Ability to deliver bioinformatics solutions to research teams and communities with a focus on user enablement.
•PhD or MSc in Bioinformatics, Computational Biology, or related field (or equivalent practical experience in a biopharmaceutical/research environment).

Experience:BiopharmaceuticalResearchBioinformatics

Education:Master's in Bioinformatics, Computational Biology, or a related field

Skills:CollaborationUser enablementDocumentationGuidanceTraining

Languages:English

Tech Stack:PythonFASTQBAMMzXMLEnsemblUniProtReactomeOpen TargetsNextflowDagsterApache BeamGoogle Cloud PlatformGCPPolarsSQLAlphaFold

Company Brief

Isomorphic Labs

Uses machine learning and computational biology to accelerate drug discovery and design novel therapeutics by modeling protein structures, mechanisms, and interactions to identify promising targets and candidates.

Industry: Biotech

Company Size: Medium (51 to 250 employees)

Growth: Growth Stage Startup

Headquarters: London, United Kingdom

Founded: 2021

Website LinkedIn

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Isomorphic Labs

3 weeks ago

Bioinformatics Engineer, London

✓ Verified Job

Canonical indexed version, validated from employer's careers page.

Source: Company careers pageValidated by: Fursa AI

Last checked: 7 hours agoStatus: Live

Job Summary

Location: London

Workplace: Hybrid

Employment Type: Full time

Job Function: Data Analytics & Business Intelligence

Key Responsibilities

•Develop and operate large-scale bioinformatics pipelines for high-throughput analysis from raw data to ML-ready datasets.
•Ingest and harmonize complex datasets using bioinformatics best practices to ensure version-controlled, high-quality inputs for model training.
•Implement rigorous versioning and mapping when harmonizing public databases (e.g., Ensembl, UniProt, Reactome, Open Targets) to prevent collisions and semantic drift.
•Partner with ML Research, Computational Biology, Drug Development, and Chemistry teams to drive adoption of the internal bioinformatics platform and standardized data primitives in daily workflows.
•Act as a “Deployed Engineer” in research projects, delivering customized solutions and feeding identified technical gaps back into the core platform, with documentation and training for the wider organization.

Key Requirements

•Proven experience processing raw bioinformatics data at scale (e.g., FASTQ, BAM, mzXML).
•Track record delivering high-quality bioinformatics outputs across modalities such as genomics, proteomics, single cell, or systems biology.
•Experience writing production-grade code in Python and developing automated, scalable bioinformatics pipelines.
•Ability to deliver bioinformatics solutions to research teams and communities with a focus on user enablement.
•PhD or MSc in Bioinformatics, Computational Biology, or related field (or equivalent practical experience in a biopharmaceutical/research environment).

Experience:BiopharmaceuticalResearchBioinformatics

Education:Master's in Bioinformatics, Computational Biology, or a related field

Skills:CollaborationUser enablementDocumentationGuidanceTraining

Languages:English

Tech Stack:PythonFASTQBAMMzXMLEnsemblUniProtReactomeOpen TargetsNextflowDagsterApache BeamGoogle Cloud PlatformGCPPolarsSQLAlphaFold

Company Brief

Isomorphic Labs

Industry: Biotech

Company Size: Medium (51 to 250 employees)

Growth: Growth Stage Startup

Headquarters: London, United Kingdom

Founded: 2021

Website LinkedIn